Picture of Gerhard Wagner

Gerhard Wagner, Ph.D.

Elkan Blout Professor of Biological Chemistry and Molecular Pharmacology

Our research is concerned with structures of proteins and protein complexes and their functional roles. We use NMR spectroscopy, other biophysical techniques, computational tools and small molecule inhibitors to reveal mechanisms and cellular significance of protein interactions.

The primary structural focus is on how eukaryotic translation initiation regulates the fate of cells. In particular, we are interested in the interaction of the cap-binding proteins eIF4E with the mRNA cap, the scaffold protein eIF4G, and the regulatory 4E-BPs, and how these interactions are related to cell transformation and apoptosis. To address this, we have identified small-molecule inhibitors of the eIF4E/eIF4G interaction and found that these may have anti-tumor activity. We are also interested in interactions of other eukaryotic initiation factors including eIF4G, eIF4A, eIF4B, eIF3, and in identifying  small-molecule inhibitors as potential therapeutic agents.

We also seek to understand mechanisms of T-cell function from structural studies. This includes the abTCR and the associated CD3 complexes. In addition, we try to understand mechanisms of downstream signaling at the level of nuclear translocation of nuclear factor of activated T cells (NFAT) through de-phosphorylation by calcineurin.

We are interested in protein-protein interactions in apoptosis. These include molecules from the Bcl-2 family and the mitochondrial membrane protein VDAC, and proteins that interact with VDAC. Recently we have developed procedures for incorporating membrane proteins in covalently circularized phospholipid nanodiscs creating stable membrane protein preparations usable for numerous membrane protein studies and membrane protein complexes.

Address: 

Room C1-112

240 Longwood Avenue

Boston, MA 02115

Publications View
Structural basis for the recruitment of ERCC1-XPF to nucleotide excision repair complexes by XPA.
Authors: Authors: Tsodikov OV, Ivanov D, Orelli B, Staresincic L, Shoshani I, Oberman R, Schärer OD, Wagner G, Ellenberger T.
EMBO J
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CTL recognition of a protective immunodominant influenza A virus nucleoprotein epitope utilizes a highly restricted Vbeta but diverse Valpha repertoire: functional and structural implications.
Authors: Authors: Zhong W, Dixit SB, Mallis RJ, Arthanari H, Lugovskoy AA, Beveridge DL, Wagner G, Reinherz EL.
J Mol Biol
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Sequence and structure evolved separately in a ribosomal ubiquitin variant.
Authors: Authors: Catic A, Sun ZY, Ratner DM, Misaghi S, Spooner E, Samuelson J, Wagner G, Ploegh HL.
EMBO J
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Position of eukaryotic initiation factor eIF5B on the 80S ribosome mapped by directed hydroxyl radical probing.
Authors: Authors: Unbehaun A, Marintchev A, Lomakin IB, Didenko T, Wagner G, Hellen CU, Pestova TV.
EMBO J
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Scleraxis and NFATc regulate the expression of the pro-alpha1(I) collagen gene in tendon fibroblasts.
Authors: Authors: Léjard V, Brideau G, Blais F, Salingcarnboriboon R, Wagner G, Roehrl MH, Noda M, Duprez D, Houillier P, Rossert J.
J Biol Chem
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Resonance assignments of the alpha subunit of human eukaryotic initiation factor 2 (heIF2alpha).
Authors: Authors: Ito T, Wagner G.
J Biomol NMR
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Structure of the calcineurin-NFAT complex: defining a T cell activation switch using solution NMR and crystal coordinates.
Authors: Authors: Takeuchi K, Roehrl MH, Sun ZY, Wagner G.
Structure
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Looking into live cells with in-cell NMR spectroscopy.
Authors: Authors: Selenko P, Wagner G.
J Struct Biol
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1-13C amino acid selective labeling in a 2H15N background for NMR studies of large proteins.
Authors: Authors: Takeuchi K, Ng E, Malia TJ, Wagner G.
J Biomol NMR
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Ultrahigh-resolution (1)H-(13)C HSQC spectra of metabolite mixtures using nonlinear sampling and forward maximum entropy reconstruction.
Authors: Authors: Hyberts SG, Heffron GJ, Tarragona NG, Solanky K, Edmonds KA, Luithardt H, Fejzo J, Chorev M, Aktas H, Colson K, Falchuk KH, Halperin JA, Wagner G.
J Am Chem Soc
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