Picture of Gerhard Wagner

Gerhard Wagner, Ph.D.

Elkan Blout Professor of Biological Chemistry and Molecular Pharmacology

Our research is concerned with structures of proteins and protein complexes and their functional roles. We use NMR spectroscopy, other biophysical techniques, computational tools and small molecule inhibitors to reveal mechanisms and cellular significance of protein interactions.

The primary structural focus is on how eukaryotic translation initiation regulates the fate of cells. In particular, we are interested in the interaction of the cap-binding proteins eIF4E with the mRNA cap, the scaffold protein eIF4G, and the regulatory 4E-BPs, and how these interactions are related to cell transformation and apoptosis. To address this, we have identified small-molecule inhibitors of the eIF4E/eIF4G interaction and found that these may have anti-tumor activity. We are also interested in interactions of other eukaryotic initiation factors including eIF4G, eIF4A, eIF4B, eIF3, and in identifying  small-molecule inhibitors as potential therapeutic agents.

We also seek to understand mechanisms of T-cell function from structural studies. This includes the abTCR and the associated CD3 complexes. In addition, we try to understand mechanisms of downstream signaling at the level of nuclear translocation of nuclear factor of activated T cells (NFAT) through de-phosphorylation by calcineurin.

We are interested in protein-protein interactions in apoptosis. These include molecules from the Bcl-2 family and the mitochondrial membrane protein VDAC, and proteins that interact with VDAC. Recently we have developed procedures for incorporating membrane proteins in covalently circularized phospholipid nanodiscs creating stable membrane protein preparations usable for numerous membrane protein studies and membrane protein complexes.

Address: 

Room C1-112

240 Longwood Avenue

Boston, MA 02115

Publications View
Application of iterative soft thresholding for fast reconstruction of NMR data non-uniformly sampled with multidimensional Poisson Gap scheduling.
Authors: Authors: Hyberts SG, Milbradt AG, Wagner AB, Arthanari H, Wagner G.
J Biomol NMR
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Applications of non-uniform sampling and processing.
Authors: Authors: Hyberts SG, Arthanari H, Wagner G.
Top Curr Chem
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TCR Mechanobiology: Torques and Tunable Structures Linked to Early T Cell Signaling.
Authors: Authors: Kim ST, Shin Y, Brazin K, Mallis RJ, Sun ZY, Wagner G, Lang MJ, Reinherz EL.
Front Immunol
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Molecular characterization of disrupted in schizophrenia-1 risk variant S704C reveals the formation of altered oligomeric assembly.
Authors: Authors: Narayanan S, Arthanari H, Wolfe MS, Wagner G.
J Biol Chem
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Speeding up direct (15)N detection: hCaN 2D NMR experiment.
Authors: Authors: Gal M, Edmonds KA, Milbradt AG, Takeuchi K, Wagner G.
J Biomol NMR
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Complexes of native ubiquitin and dodecyl sulfate illustrate the nature of hydrophobic and electrostatic interactions in the binding of proteins and surfactants.
Authors: Authors: Shaw BF, Schneider GF, Arthanari H, Narovlyansky M, Moustakas D, Durazo A, Wagner G, Whitesides GM.
J Am Chem Soc
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Antibody mechanics on a membrane-bound HIV segment essential for GP41-targeted viral neutralization.
Authors: Authors: Kim M, Sun ZY, Rand KD, Shi X, Song L, Cheng Y, Fahmy AF, Majumdar S, Ofek G, Yang Y, Kwong PD, Wang JH, Engen JR, Wagner G, Reinherz EL.
Nat Struct Mol Biol
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Optimization of van der Waals energy for protein side-chain placement and design.
Authors: Authors: Fahmy A, Wagner G.
Biophys J
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A novel 4E-interacting protein in Leishmania is involved in stage-specific translation pathways.
Authors: Authors: Zinoviev A, Léger M, Wagner G, Shapira M.
Nucleic Acids Res
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Metabolic regulation of protein N-alpha-acetylation by Bcl-xL promotes cell survival.
Authors: Authors: Yi CH, Pan H, Seebacher J, Jang IH, Hyberts SG, Heffron GJ, Vander Heiden MG, Yang R, Li F, Locasale JW, Sharfi H, Zhai B, Rodriguez-Mias R, Luithardt H, Cantley LC, Daley GQ, Asara JM, Gygi SP, Wagner G, Liu CF, Yuan J.
Cell
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