Picture of Gerhard Wagner

Gerhard Wagner, Ph.D.

Elkan Blout Professor of Biological Chemistry and Molecular Pharmacology

Our research is concerned with structures of proteins and protein complexes and their functional roles. We use NMR spectroscopy, other biophysical techniques, computational tools and small molecule inhibitors to reveal mechanisms and cellular significance of protein interactions.

The primary structural focus is on how eukaryotic translation initiation regulates the fate of cells. In particular, we are interested in the interaction of the cap-binding proteins eIF4E with the mRNA cap, the scaffold protein eIF4G, and the regulatory 4E-BPs, and how these interactions are related to cell transformation and apoptosis. To address this, we have identified small-molecule inhibitors of the eIF4E/eIF4G interaction and found that these may have anti-tumor activity. We are also interested in interactions of other eukaryotic initiation factors including eIF4G, eIF4A, eIF4B, eIF3, and in identifying  small-molecule inhibitors as potential therapeutic agents.

We also seek to understand mechanisms of T-cell function from structural studies. This includes the abTCR and the associated CD3 complexes. In addition, we try to understand mechanisms of downstream signaling at the level of nuclear translocation of nuclear factor of activated T cells (NFAT) through de-phosphorylation by calcineurin.

We are interested in protein-protein interactions in apoptosis. These include molecules from the Bcl-2 family and the mitochondrial membrane protein VDAC, and proteins that interact with VDAC. Recently we have developed procedures for incorporating membrane proteins in covalently circularized phospholipid nanodiscs creating stable membrane protein preparations usable for numerous membrane protein studies and membrane protein complexes.

Address: 

Room C1-112

240 Longwood Avenue

Boston, MA 02115

Publications View
Phosphoglycerate dehydrogenase diverts glycolytic flux and contributes to oncogenesis.
Authors: Authors: Locasale JW, Grassian AR, Melman T, Lyssiotis CA, Mattaini KR, Bass AJ, Heffron G, Metallo CM, Muranen T, Sharfi H, Sasaki AT, Anastasiou D, Mullarky E, Vokes NI, Sasaki M, Beroukhim R, Stephanopoulos G, Ligon AH, Meyerson M, Richardson AL, Chin L, Wagner G, Asara JM, Brugge JS, Cantley LC, Vander Heiden MG.
Nat Genet
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Structure of the VP16 transactivator target in the Mediator.
Authors: Authors: Milbradt AG, Kulkarni M, Yi T, Takeuchi K, Sun ZY, Luna RE, Selenko P, Näär AM, Wagner G.
Nat Struct Mol Biol
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Global dynamic conformational changes in the suppressor domain of IP3 receptor by stepwise binding of the two lobes of calmodulin.
Authors: Authors: Kang S, Kwon H, Wen H, Song Y, Frueh D, Ahn HC, Yoo SH, Wagner G, Park S.
FASEB J
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Heteronuclear decoupling by multiple rotating frame technique.
Authors: Authors: Arthanari H, Wagner G, Khaneja N.
J Magn Reson
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Inhibition of the interactions between eukaryotic initiation factors 4E and 4G impairs long-term associative memory consolidation but not reconsolidation.
Authors: Authors: Hoeffer CA, Cowansage KK, Arnold EC, Banko JL, Moerke NJ, Rodriguez R, Schmidt EK, Klosi E, Chorev M, Lloyd RE, Pierre P, Wagner G, LeDoux JE, Klann E.
Proc Natl Acad Sci U S A
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Optimal pulse design in quantum control: a unified computational method.
Authors: Authors: Li JS, Ruths J, Yu TY, Arthanari H, Wagner G.
Proc Natl Acad Sci U S A
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HNCA-TOCSY-CANH experiments with alternate (13)C- (12)C labeling: a set of 3D experiment with unique supra-sequential information for mainchain resonance assignment.
Authors: Authors: Takeuchi K, Gal M, Takahashi H, Shimada I, Wagner G.
J Biomol NMR
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Neutralizing positive charges at the surface of a protein lowers its rate of amide hydrogen exchange without altering its structure or increasing its thermostability.
Authors: Authors: Shaw BF, Arthanari H, Narovlyansky M, Durazo A, Frueh DP, Pollastri MP, Lee A, Bilgicer B, Gygi SP, Wagner G, Whitesides GM.
J Am Chem Soc
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Small molecule inhibition of phosphatidylinositol-3,4,5-triphosphate (PIP3) binding to pleckstrin homology domains.
Authors: Authors: Miao B, Skidan I, Yang J, Lugovskoy A, Reibarkh M, Long K, Brazell T, Durugkar KA, Maki J, Ramana CV, Schaffhausen B, Wagner G, Torchilin V, Yuan J, Degterev A.
Proc Natl Acad Sci U S A
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Evidence for an alternative glycolytic pathway in rapidly proliferating cells.
Authors: Authors: Vander Heiden MG, Locasale JW, Swanson KD, Sharfi H, Heffron GJ, Amador-Noguez D, Christofk HR, Wagner G, Rabinowitz JD, Asara JM, Cantley LC.
Science
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