Picture of Donald Coen

Donald Mark Coen, Ph.D.

Professor of Biological Chemistry and Molecular Pharmacology

Our laboratory takes molecular approaches to herpesvirus replication and latency. Current projects focus on the biogenesis, mechanisms of repression, and biological roles of viral microRNAs during HSV infection.

Research:

Our laboratory takes molecular approaches to herpesvirus replication and latency.  These studies provide excellent models for biological processes in eukaryotic cells and, because herpesviruses such as herpes simplex virus (HSV) and human cytomegalovirus (HCMV) are important pathogens, to exploit differences between herpesvirus and cellular processes for safe and effective antiviral therapy.   Areas of research include:

Novel post-transcriptional regulatory mechanisms.  Current projects focus on the biogenesis, mechanisms of repression, and biological roles of viral microRNAs during HSV infection.

Herpesvirus DNA replication proteins:  Projects include determining the 3-D structures of these proteins (with the Hogle lab), and the roles of poorly understood structural domains, and exploring their interactions with each other, cellular proteins, and nucleic acids via biochemical, mutational, and biophysical approaches, including (with the Loparo and Golan labs) single molecule methods.   These studies should permit detailed understanding of these complicated proteins and rational drug design.

Nuclear egress:  How do HCMV nucleocapsids move towards and gain access to the inner nuclear membrane, and bud through it?  Projects include biochemical and biophysical studies of a viral enzyme that mimics cyclin-dependent kinase and of a nuclear egress complex (in collaboration with the Hogle lab), and molecular genetic and cell biological studies of these proteins' functions in infected cells.

Drug targets and development of new therapies.   Aside from studies of established drug targets (herpesvirus DNA polymerases and the HCMV protein kinase), projects include discovering new antiviral drugs that inhibit protein-protein interactions, and finding new drug targets by a combination of "chemical genetic" and molecular genetic approaches.

HSV latency/pathogenesis.  HSV forms latent infections that persist for the life of the host.  How this occurs is biologically fascinating and clinically important.  Projects entail molecular genetic, and PCR-basedmethods to explore viral gene regulation especially how viral and host microRNAs repress viral gene expression, thereby maintaining latency.

Address: 

Room SGM - 304

250 Longwood Avenue

Boston, MA 02115

Publications View
Human cytomegalovirus protein kinase UL97 forms a complex with the tegument phosphoprotein pp65.
Authors: Authors: Kamil JP, Coen DM.
J Virol
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Inhibitors of the sodium potassium ATPase that impair herpes simplex virus replication identified via a chemical screening approach.
Authors: Authors: Dodson AW, Taylor TJ, Knipe DM, Coen DM.
Virology
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Expression of extremely low levels of thymidine kinase from an acyclovir-resistant herpes simplex virus mutant supports reactivation from latently infected mouse trigeminal ganglia.
Authors: Authors: Besecker MI, Furness CL, Coen DM, Griffiths A.
J Virol
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In vivo fitness and virulence of a drug-resistant herpes simplex virus 1 mutant.
Authors: Authors: Pesola JM, Coen DM.
J Gen Virol
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Mutations that decrease DNA binding of the processivity factor of the herpes simplex virus DNA polymerase reduce viral yield, alter the kinetics of viral DNA replication, and decrease the fidelity of DNA replication.
Authors: Authors: Jiang C, Hwang YT, Randell JC, Coen DM, Hwang CB.
J Virol
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Binding parameters and thermodynamics of the interaction of the human cytomegalovirus DNA polymerase accessory protein, UL44, with DNA: implications for the processivity mechanism.
Authors: Authors: Loregian A, Sinigalia E, Mercorelli B, Palù G, Coen DM.
Nucleic Acids Res
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Enzymatic amplification of DNA by PCR: standard procedures and optimization.
Authors: Authors: Kramer MF, Coen DM.
Curr Protoc Cytom
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Low-level expression and reversion both contribute to reactivation of herpes simplex virus drug-resistant mutants with mutations on homopolymeric sequences in thymidine kinase.
Authors: Authors: Griffiths A, Link MA, Furness CL, Coen DM.
J Virol
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Prediction and identification of herpes simplex virus 1-encoded microRNAs.
Authors: Authors: Cui C, Griffiths A, Li G, Silva LM, Kramer MF, Gaasterland T, Wang XJ, Coen DM.
J Virol
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Virucidal activity of a GT-rich oligonucleotide against herpes simplex virus mediated by glycoprotein B.
Authors: Authors: Shogan B, Kruse L, Mulamba GB, Hu A, Coen DM.
J Virol
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