Picture of Donald Coen

Donald Mark Coen, Ph.D.

Professor of Biological Chemistry and Molecular Pharmacology

Our laboratory takes molecular approaches to herpesvirus replication and latency. Current projects focus on the biogenesis, mechanisms of repression, and biological roles of viral microRNAs during HSV infection.

Research:

Our laboratory takes molecular approaches to herpesvirus replication and latency.  These studies provide excellent models for biological processes in eukaryotic cells and, because herpesviruses such as herpes simplex virus (HSV) and human cytomegalovirus (HCMV) are important pathogens, to exploit differences between herpesvirus and cellular processes for safe and effective antiviral therapy.   Areas of research include:

Novel post-transcriptional regulatory mechanisms.  Current projects focus on the biogenesis, mechanisms of repression, and biological roles of viral microRNAs during HSV infection.

Herpesvirus DNA replication proteins:  Projects include determining the 3-D structures of these proteins (with the Hogle lab), and the roles of poorly understood structural domains, and exploring their interactions with each other, cellular proteins, and nucleic acids via biochemical, mutational, and biophysical approaches, including (with the Loparo and Golan labs) single molecule methods.   These studies should permit detailed understanding of these complicated proteins and rational drug design.

Nuclear egress:  How do HCMV nucleocapsids move towards and gain access to the inner nuclear membrane, and bud through it?  Projects include biochemical and biophysical studies of a viral enzyme that mimics cyclin-dependent kinase and of a nuclear egress complex (in collaboration with the Hogle lab), and molecular genetic and cell biological studies of these proteins' functions in infected cells.

Drug targets and development of new therapies.   Aside from studies of established drug targets (herpesvirus DNA polymerases and the HCMV protein kinase), projects include discovering new antiviral drugs that inhibit protein-protein interactions, and finding new drug targets by a combination of "chemical genetic" and molecular genetic approaches.

HSV latency/pathogenesis.  HSV forms latent infections that persist for the life of the host.  How this occurs is biologically fascinating and clinically important.  Projects entail molecular genetic, and PCR-basedmethods to explore viral gene regulation especially how viral and host microRNAs repress viral gene expression, thereby maintaining latency.

Address: 

Room SGM - 304

250 Longwood Avenue

Boston, MA 02115

Publications View
Crystal structure of the cytomegalovirus DNA polymerase subunit UL44 in complex with the C terminus from the catalytic subunit. Differences in structure and function relative to unliganded UL44.
Authors: Authors: Appleton BA, Brooks J, Loregian A, Filman DJ, Coen DM, Hogle JM.
J Biol Chem
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Selective anti-cytomegalovirus compounds discovered by screening for inhibitors of subunit interactions of the viral polymerase.
Authors: Authors: Loregian A, Coen DM.
Chem Biol
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Herpes simplex virus 1 immediate-early and early gene expression during reactivation from latency under conditions that prevent infectious virus production.
Authors: Authors: Pesola JM, Zhu J, Knipe DM, Coen DM.
J Virol
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Herpesviral latency-associated transcript gene promotes assembly of heterochromatin on viral lytic-gene promoters in latent infection.
Authors: Authors: Wang QY, Zhou C, Johnson KE, Colgrove RC, Coen DM, Knipe DM.
Proc Natl Acad Sci U S A
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Effects of substitutions of arginine residues on the basic surface of herpes simplex virus UL42 support a role for DNA binding in processive DNA synthesis.
Authors: Authors: Randell JC, Komazin G, Jiang C, Hwang CB, Coen DM.
J Virol
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An unusual internal ribosome entry site in the herpes simplex virus thymidine kinase gene.
Authors: Authors: Griffiths A, Coen DM.
Proc Natl Acad Sci U S A
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A selective inhibitor of eIF2alpha dephosphorylation protects cells from ER stress.
Authors: Authors: Boyce M, Bryant KF, Jousse C, Long K, Harding HP, Scheuner D, Kaufman RJ, Ma D, Coen DM, Ron D, Yuan J.
Science
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Binding of herpes simplex virus-1 US11 to specific RNA sequences.
Authors: Authors: Bryant KF, Cox JC, Wang H, Hogle JM, Ellington AD, Coen DM.
Nucleic Acids Res
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Persistent expression of chemokine and chemokine receptor RNAs at primary and latent sites of herpes simplex virus 1 infection.
Authors: Authors: Cook WJ, Kramer MF, Walker RM, Burwell TJ, Holman HA, Coen DM, Knipe DM.
Virol J
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Specific residues in the connector loop of the human cytomegalovirus DNA polymerase accessory protein UL44 are crucial for interaction with the UL54 catalytic subunit.
Authors: Authors: Loregian A, Appleton BA, Hogle JM, Coen DM.
J Virol
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