Picture of Donald Coen

Donald Mark Coen, Ph.D.

Professor of Biological Chemistry and Molecular Pharmacology

Our laboratory takes molecular approaches to herpesvirus replication and latency. Current projects focus on the biogenesis, mechanisms of repression, and biological roles of viral microRNAs during HSV infection.

Research:

Our laboratory takes molecular approaches to herpesvirus replication and latency.  These studies provide excellent models for biological processes in eukaryotic cells and, because herpesviruses such as herpes simplex virus (HSV) and human cytomegalovirus (HCMV) are important pathogens, to exploit differences between herpesvirus and cellular processes for safe and effective antiviral therapy.   Areas of research include:

Novel post-transcriptional regulatory mechanisms.  Current projects focus on the biogenesis, mechanisms of repression, and biological roles of viral microRNAs during HSV infection.

Herpesvirus DNA replication proteins:  Projects include determining the 3-D structures of these proteins (with the Hogle lab), and the roles of poorly understood structural domains, and exploring their interactions with each other, cellular proteins, and nucleic acids via biochemical, mutational, and biophysical approaches, including (with the Loparo and Golan labs) single molecule methods.   These studies should permit detailed understanding of these complicated proteins and rational drug design.

Nuclear egress:  How do HCMV nucleocapsids move towards and gain access to the inner nuclear membrane, and bud through it?  Projects include biochemical and biophysical studies of a viral enzyme that mimics cyclin-dependent kinase and of a nuclear egress complex (in collaboration with the Hogle lab), and molecular genetic and cell biological studies of these proteins' functions in infected cells.

Drug targets and development of new therapies.   Aside from studies of established drug targets (herpesvirus DNA polymerases and the HCMV protein kinase), projects include discovering new antiviral drugs that inhibit protein-protein interactions, and finding new drug targets by a combination of "chemical genetic" and molecular genetic approaches.

HSV latency/pathogenesis.  HSV forms latent infections that persist for the life of the host.  How this occurs is biologically fascinating and clinically important.  Projects entail molecular genetic, and PCR-basedmethods to explore viral gene regulation especially how viral and host microRNAs repress viral gene expression, thereby maintaining latency.

Address: 

Room SGM - 304

250 Longwood Avenue

Boston, MA 02115

Publications View
Binding of herpes simplex virus-1 US11 to specific RNA sequences.
Authors: Authors: Bryant KF, Cox JC, Wang H, Hogle JM, Ellington AD, Coen DM.
Nucleic Acids Res
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Persistent expression of chemokine and chemokine receptor RNAs at primary and latent sites of herpes simplex virus 1 infection.
Authors: Authors: Cook WJ, Kramer MF, Walker RM, Burwell TJ, Holman HA, Coen DM, Knipe DM.
Virol J
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Specific residues in the connector loop of the human cytomegalovirus DNA polymerase accessory protein UL44 are crucial for interaction with the UL54 catalytic subunit.
Authors: Authors: Loregian A, Appleton BA, Hogle JM, Coen DM.
J Virol
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The cytomegalovirus DNA polymerase subunit UL44 forms a C clamp-shaped dimer.
Authors: Authors: Appleton BA, Loregian A, Filman DJ, Coen DM, Hogle JM.
Mol Cell
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Phosphorylation of the RNA polymerase II carboxyl-terminal domain in human cytomegalovirus-infected cells and in vitro by the viral UL97 protein kinase.
Authors: Authors: Baek MC, Krosky PM, Pearson A, Coen DM.
Virology
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Identification of a small molecule that inhibits herpes simplex virus DNA Polymerase subunit interactions and viral replication.
Authors: Authors: Pilger BD, Cui C, Coen DM.
Chem Biol
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The herpes simplex virus processivity factor, UL42, binds DNA as a monomer.
Authors: Authors: Randell JC, Coen DM.
J Mol Biol
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Residues of human cytomegalovirus DNA polymerase catalytic subunit UL54 that are necessary and sufficient for interaction with the accessory protein UL44.
Authors: Authors: Loregian A, Appleton BA, Hogle JM, Coen DM.
J Virol
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ICP27 selectively regulates the cytoplasmic localization of a subset of viral transcripts in herpes simplex virus type 1-infected cells.
Authors: Authors: Pearson A, Knipe DM, Coen DM.
J Virol
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Failure of thymidine kinase-negative herpes simplex virus to reactivate from latency following efficient establishment.
Authors: Authors: Chen SH, Pearson A, Coen DM, Chen SH.
J Virol
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