Picture of Gerhard Wagner

Gerhard Wagner, Ph.D.

Elkan Blout Professor of Biological Chemistry and Molecular Pharmacology

Our research is concerned with structures of proteins and protein complexes and their functional roles. We use NMR spectroscopy, other biophysical techniques, computational tools and small molecule inhibitors to reveal mechanisms and cellular significance of protein interactions.

The primary structural focus is on how eukaryotic translation initiation regulates the fate of cells. In particular, we are interested in the interaction of the cap-binding proteins eIF4E with the mRNA cap, the scaffold protein eIF4G, and the regulatory 4E-BPs, and how these interactions are related to cell transformation and apoptosis. To address this, we have identified small-molecule inhibitors of the eIF4E/eIF4G interaction and found that these may have anti-tumor activity. We are also interested in interactions of other eukaryotic initiation factors including eIF4G, eIF4A, eIF4B, eIF3, and in identifying  small-molecule inhibitors as potential therapeutic agents.

We also seek to understand mechanisms of T-cell function from structural studies. This includes the abTCR and the associated CD3 complexes. In addition, we try to understand mechanisms of downstream signaling at the level of nuclear translocation of nuclear factor of activated T cells (NFAT) through de-phosphorylation by calcineurin.

We are interested in protein-protein interactions in apoptosis. These include molecules from the Bcl-2 family and the mitochondrial membrane protein VDAC, and proteins that interact with VDAC. Recently we have developed procedures for incorporating membrane proteins in covalently circularized phospholipid nanodiscs creating stable membrane protein preparations usable for numerous membrane protein studies and membrane protein complexes.

Address: 

Room C1-112

240 Longwood Avenue

Boston, MA 02115

Publications View
Pulse design for broadband correlation NMR spectroscopy by multi-rotating frames.
Authors: Authors: Coote P, Arthanari H, Yu TY, Natarajan A, Wagner G, Khaneja N.
J Biomol NMR
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Optimized phospholipid bilayer nanodiscs facilitate high-resolution structure determination of membrane proteins.
Authors: Authors: Hagn F, Etzkorn M, Raschle T, Wagner G.
J Am Chem Soc
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Exploring signal-to-noise ratio and sensitivity in non-uniformly sampled multi-dimensional NMR spectra.
Authors: Authors: Hyberts SG, Robson SA, Wagner G.
J Biomol NMR
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Impact of macromolecular crowding on DNA replication.
Authors: Authors: Akabayov B, Akabayov SR, Lee SJ, Wagner G, Richardson CC.
Nat Commun
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NMR solution structure and condition-dependent oligomerization of the antimicrobial peptide human defensin 5.
Authors: Authors: Wommack AJ, Robson SA, Wanniarachchi YA, Wan A, Turner CJ, Wagner G, Nolan EM.
Biochemistry
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The kinetochore-bound Ska1 complex tracks depolymerizing microtubules and binds to curved protofilaments.
Authors: Authors: Schmidt JC, Arthanari H, Boeszoermenyi A, Dashkevich NM, Wilson-Kubalek EM, Monnier N, Markus M, Oberer M, Milligan RA, Bathe M, Wagner G, Grishchuk EL, Cheeseman IM.
Dev Cell
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Tumor suppression by small molecule inhibitors of translation initiation.
Authors: Authors: Chen L, Aktas BH, Wang Y, He X, Sahoo R, Zhang N, Denoyelle S, Kabha E, Yang H, Freedman RY, Supko JG, Chorev M, Wagner G, Halperin JA.
Oncotarget
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The C-terminal domain of eukaryotic initiation factor 5 promotes start codon recognition by its dynamic interplay with eIF1 and eIF2ß.
Authors: Authors: Luna RE, Arthanari H, Hiraishi H, Nanda J, Martin-Marcos P, Markus MA, Akabayov B, Milbradt AG, Luna LE, Seo HC, Hyberts SG, Fahmy A, Reibarkh M, Miles D, Hagner PR, O'Day EM, Yi T, Marintchev A, Hinnebusch AG, Lorsch JR, Asano K, Wagner G.
Cell Rep
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Solution NMR spectroscopic characterization of human VDAC-2 in detergent micelles and lipid bilayer nanodiscs.
Authors: Authors: Yu TY, Raschle T, Hiller S, Wagner G.
Biochim Biophys Acta
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Lipid dynamics and protein-lipid interactions in 2D crystals formed with the ß-barrel integral membrane protein VDAC1.
Authors: Authors: Eddy MT, Ong TC, Clark L, Teijido O, van der Wel PC, Garces R, Wagner G, Rostovtseva TK, Griffin RG.
J Am Chem Soc
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