Picture of Gerhard Wagner

Gerhard Wagner, Ph.D.

Elkan Blout Professor of Biological Chemistry and Molecular Pharmacology

Our research is concerned with structures of proteins and protein complexes and their functional roles. We use NMR spectroscopy, other biophysical techniques, computational tools and small molecule inhibitors to reveal mechanisms and cellular significance of protein interactions.

The primary structural focus is on how eukaryotic translation initiation regulates the fate of cells. In particular, we are interested in the interaction of the cap-binding proteins eIF4E with the mRNA cap, the scaffold protein eIF4G, and the regulatory 4E-BPs, and how these interactions are related to cell transformation and apoptosis. To address this, we have identified small-molecule inhibitors of the eIF4E/eIF4G interaction and found that these may have anti-tumor activity. We are also interested in interactions of other eukaryotic initiation factors including eIF4G, eIF4A, eIF4B, eIF3, and in identifying  small-molecule inhibitors as potential therapeutic agents.

We also seek to understand mechanisms of T-cell function from structural studies. This includes the abTCR and the associated CD3 complexes. In addition, we try to understand mechanisms of downstream signaling at the level of nuclear translocation of nuclear factor of activated T cells (NFAT) through de-phosphorylation by calcineurin.

We are interested in protein-protein interactions in apoptosis. These include molecules from the Bcl-2 family and the mitochondrial membrane protein VDAC, and proteins that interact with VDAC. Recently we have developed procedures for incorporating membrane proteins in covalently circularized phospholipid nanodiscs creating stable membrane protein preparations usable for numerous membrane protein studies and membrane protein complexes.

Address: 

Room C1-112

240 Longwood Avenue

Boston, MA 02115

Publications View
Using codon optimization, chaperone co-expression, and rational mutagenesis for production and NMR assignments of human eIF2 alpha.
Authors: Authors: Ito T, Wagner G.
J Biomol NMR
View full abstract on Pubmed
Structural and functional analysis of human cytomegalovirus US3 protein.
Authors: Authors: Misaghi S, Sun ZY, Stern P, Gaudet R, Wagner G, Ploegh H.
J Virol
View full abstract on Pubmed
Translation initiation: structures, mechanisms and evolution.
Authors: Authors: Marintchev A, Wagner G.
Q Rev Biophys
View full abstract on Pubmed
Ribosome loading onto the mRNA cap is driven by conformational coupling between eIF4G and eIF4E.
Authors: Authors: Gross JD, Moerke NJ, von der Haar T, Lugovskoy AA, Sachs AB, McCarthy JE, Wagner G.
Cell
View full abstract on Pubmed
Position of eukaryotic initiation factor eIF1 on the 40S ribosomal subunit determined by directed hydroxyl radical probing.
Authors: Authors: Lomakin IB, Kolupaeva VG, Marintchev A, Wagner G, Pestova TV.
Genes Dev
View full abstract on Pubmed
Broadband 13C-13C adiabatic mixing in solution optimized for high fields.
Authors: Authors: Bennett AE, Gross JD, Wagner G.
J Magn Reson
View full abstract on Pubmed
Structural investigations of a GYF domain covalently linked to a proline-rich peptide.
Authors: Authors: Freund C, Kühne R, Park S, Thiemke K, Reinherz EL, Wagner G.
J Biomol NMR
View full abstract on Pubmed
A zinc clasp structure tethers Lck to T cell coreceptors CD4 and CD8.
Authors: Authors: Kim PW, Sun ZY, Blacklow SC, Wagner G, Eck MJ.
Science
View full abstract on Pubmed
Rapid backbone 1H, 13C, and 15N assignment of the V1 domain of human PKC iota using the new program IBIS.
Authors: Authors: Roehrl MH, Hyberts SG, Sun ZY, Fields AP, Wagner G.
J Biomol NMR
View full abstract on Pubmed
IBIS--a tool for automated sequential assignment of protein spectra from triple resonance experiments.
Authors: Authors: Hyberts SG, Wagner G.
J Biomol NMR
View full abstract on Pubmed