Picture of Gerhard Wagner

Gerhard Wagner, Ph.D.

Elkan Blout Professor of Biological Chemistry and Molecular Pharmacology

Our research is concerned with structures of proteins and protein complexes and their functional roles. We use NMR spectroscopy, other biophysical techniques, computational tools and small molecule inhibitors to reveal mechanisms and cellular significance of protein interactions.

The primary structural focus is on how eukaryotic translation initiation regulates the fate of cells. In particular, we are interested in the interaction of the cap-binding proteins eIF4E with the mRNA cap, the scaffold protein eIF4G, and the regulatory 4E-BPs, and how these interactions are related to cell transformation and apoptosis. To address this, we have identified small-molecule inhibitors of the eIF4E/eIF4G interaction and found that these may have anti-tumor activity. We are also interested in interactions of other eukaryotic initiation factors including eIF4G, eIF4A, eIF4B, eIF3, and in identifying  small-molecule inhibitors as potential therapeutic agents.

We also seek to understand mechanisms of T-cell function from structural studies. This includes the abTCR and the associated CD3 complexes. In addition, we try to understand mechanisms of downstream signaling at the level of nuclear translocation of nuclear factor of activated T cells (NFAT) through de-phosphorylation by calcineurin.

We are interested in protein-protein interactions in apoptosis. These include molecules from the Bcl-2 family and the mitochondrial membrane protein VDAC, and proteins that interact with VDAC. Recently we have developed procedures for incorporating membrane proteins in covalently circularized phospholipid nanodiscs creating stable membrane protein preparations usable for numerous membrane protein studies and membrane protein complexes.

Address: 

Room C1-112

240 Longwood Avenue

Boston, MA 02115

Publications View
Solution structure of the HIV-1 integrase-binding domain in LEDGF/p75.
Authors: Authors: Cherepanov P, Sun ZY, Rahman S, Maertens G, Wagner G, Engelman A.
Nat Struct Mol Biol
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Correspondence between spin-dynamic phases and pulse program phases of NMR spectrometers.
Authors: Authors: Roehrl MH, Heffron GJ, Wagner G.
J Magn Reson
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High-resolution aliphatic side-chain assignments in 3D HCcoNH experiments with joint H-C evolution and non-uniform sampling.
Authors: Authors: Sun ZY, Hyberts SG, Rovnyak D, Park S, Stern AS, Hoch JC, Wagner G.
J Biomol NMR
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Sensitivity enhancement in NMR of macromolecules by application of optimal control theory.
Authors: Authors: Frueh DP, Ito T, Li JS, Wagner G, Glaser SJ, Khaneja N.
J Biomol NMR
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Mammalian SCAN domain dimer is a domain-swapped homolog of the HIV capsid C-terminal domain.
Authors: Authors: Ivanov D, Stone JR, Maki JL, Collins T, Wagner G.
Mol Cell
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Discovery of small-molecule inhibitors of the NFAT--calcineurin interaction by competitive high-throughput fluorescence polarization screening.
Authors: Authors: Roehrl MH, Wang JY, Wagner G.
Biochemistry
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A general framework for development and data analysis of competitive high-throughput screens for small-molecule inhibitors of protein-protein interactions by fluorescence polarization.
Authors: Authors: Roehrl MH, Wang JY, Wagner G.
Biochemistry
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Solution structure of the CD3epsilondelta ectodomain and comparison with CD3epsilongamma as a basis for modeling T cell receptor topology and signaling.
Authors: Authors: Sun ZY, Kim ST, Kim IC, Fahmy A, Reinherz EL, Wagner G.
Proc Natl Acad Sci U S A
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Ubiquitin family proteins and their relationship to the proteasome: a structural perspective.
Authors: Authors: Walters KJ, Goh AM, Wang Q, Wagner G, Howley PM.
Biochim Biophys Acta
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NMR structure of the flavin domain from soluble methane monooxygenase reductase from Methylococcus capsulatus (Bath).
Authors: Authors: Chatwood LL, Müller J, Gross JD, Wagner G, Lippard SJ.
Biochemistry
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