Picture of Gerhard Wagner

Gerhard Wagner, Ph.D.

Elkan Blout Professor of Biological Chemistry and Molecular Pharmacology

Our research is concerned with structures of proteins and protein complexes and their functional roles. We use NMR spectroscopy, other biophysical techniques, computational tools and small molecule inhibitors to reveal mechanisms and cellular significance of protein interactions.

The primary structural focus is on how eukaryotic translation initiation regulates the fate of cells. In particular, we are interested in the interaction of the cap-binding proteins eIF4E with the mRNA cap, the scaffold protein eIF4G, and the regulatory 4E-BPs, and how these interactions are related to cell transformation and apoptosis. To address this, we have identified small-molecule inhibitors of the eIF4E/eIF4G interaction and found that these may have anti-tumor activity. We are also interested in interactions of other eukaryotic initiation factors including eIF4G, eIF4A, eIF4B, eIF3, and in identifying  small-molecule inhibitors as potential therapeutic agents.

We also seek to understand mechanisms of T-cell function from structural studies. This includes the abTCR and the associated CD3 complexes. In addition, we try to understand mechanisms of downstream signaling at the level of nuclear translocation of nuclear factor of activated T cells (NFAT) through de-phosphorylation by calcineurin.

We are interested in protein-protein interactions in apoptosis. These include molecules from the Bcl-2 family and the mitochondrial membrane protein VDAC, and proteins that interact with VDAC. Recently we have developed procedures for incorporating membrane proteins in covalently circularized phospholipid nanodiscs creating stable membrane protein preparations usable for numerous membrane protein studies and membrane protein complexes.

Address: 

Room C1-112

240 Longwood Avenue

Boston, MA 02115

Publications View
Determination of all nOes in 1H-13C-Me-ILV-U-2H-15N proteins with two time-shared experiments.
Authors: Authors: Frueh DP, Vosburg DA, Walsh CT, Wagner G.
J Biomol NMR
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Investigating macromolecules inside cultured and injected cells by in-cell NMR spectroscopy.
Authors: Authors: Serber Z, Selenko P, Hänsel R, Reckel S, Löhr F, Ferrell JE, Wagner G, Dötsch V.
Nat Protoc
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The eukaryotic initiation factor (eIF) 5 HEAT domain mediates multifactor assembly and scanning with distinct interfaces to eIF1, eIF2, eIF3, and eIF4G.
Authors: Authors: Yamamoto Y, Singh CR, Marintchev A, Hall NS, Hannig EM, Wagner G, Asano K.
Proc Natl Acad Sci U S A
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Unambiguous assignment of NMR protein backbone signals with a time-shared triple-resonance experiment.
Authors: Authors: Frueh DP, Arthanari H, Wagner G.
J Biomol NMR
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Multiple conformations in the ligand-binding site of the yeast nuclear pore-targeting domain of Nup116p.
Authors: Authors: Robinson MA, Park S, Sun ZY, Silver PA, Wagner G, Hogle JM.
J Biol Chem
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A methylation-dependent electrostatic switch controls DNA repair and transcriptional activation by E. coli ada.
Authors: Authors: He C, Hus JC, Sun LJ, Zhou P, Norman DP, Dötsch V, Wei H, Gross JD, Lane WS, Wagner G, Verdine GL.
Mol Cell
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eIF4G and CBP80 share a common origin and similar domain organization: implications for the structure and function of eIF4G.
Authors: Authors: Marintchev A, Wagner G.
Biochemistry
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Structural basis for the enhancement of eIF4A helicase activity by eIF4G.
Authors: Authors: Oberer M, Marintchev A, Wagner G.
Genes Dev
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Fast assignment of 15N-HSQC peaks using high-resolution 3D HNcocaNH experiments with non-uniform sampling.
Authors: Authors: Sun ZY, Frueh DP, Selenko P, Hoch JC, Wagner G.
J Biomol NMR
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Synthetic studies toward aryl-(4-aryl-4H-[1,2,4]triazole-3-yl)-amine from 1,3-diarylthiourea as urea mimetics.
Authors: Authors: Natarajan A, Guo Y, Arthanari H, Wagner G, Halperin JA, Chorev M.
J Org Chem
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